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Making a Bacterial Camera - Interview with Chris Voigt

Listen to the following interview from the BBC's The Naked Scientists radio program with Chris Voigt, a scientist at the University of California, San Francisco, and fill in the blanks in the transcript below. When you are finished, check your answers, and then continue to this page, which presents a completed transcript and additional exercises about the interview. When you are finished, you can click here to go to a separate page with a complete transcript of the interview.

 

Chris S - What have you done?

Chris V - What we've done is to use to create a of bacteria that's able to respond to . The way that we do this is…If you look in a pond, a dirty pond, you'll see a green sludge. That sludge sometimes is bacteria, and the it's green is because it is able to do photosynthesis. And so it has to be able to see light. So, we took a from that bacteria that’s in that pond and we modified it so that it works in a bacteria that is living in your gut, that doesn’t have to see light. (E. coli?) That’s right, E. coli. By bringing in this gene and doing a couple other modifications to the of E. coli, we made it so that individual E. coli cells are able to see light.

Chris S - When you a light on them, what does it do to the bacteria?

Chris V - It has a special of protein, which is a molecule, much of the bacteria is made of protein, and this protein is on the surface of the bacterium. It's special in that it has a chemical that, when light is shined onto that chemical, then it changes the of the protein. This change in shape of the protein is recognized by the bacteria, and this on a gene. And so in this way, you can shining light on the bacteria to the activation of a gene.

Chris S - And what sort of things have you made it activate? In your paper that you published this week, you actually made your bacteria change colour. What else could you do?

Chris V - You could imagine using this for a of applications. For example, in thinking about complex materials—it’s very hard to work with proteins, just from a perspective—and it would be if you were able to print proteins with a very high resolution. We are thinking about using this system in order to have bacteria turn on the production of proteins that maybe produce a particular material like , or possibly do some sort of interesting .

Chris S - If you bought these bacteria as a digital camera in the shops, what number of megapixels would it say on the box?

Chris V - If it is able to turn on individual bacteria, it would be about megapixels.

Chris S - So that's tiny resolution you can work at. You can make really, really fine structures.

Chris V – Exactly, so each bacteria is like a on a .

Kat - Are these bacteria dangerous at all?

Chris V - No, they're completely . What we're using is known as a of E. coli. This differs from strains in that almost % of its genome is . Specifically, this strain of bacteria is in the lab because it's a very strain.

Kat – So it’s had all the bad stuff taken out of it.

Chris V – Everything’s been , everything that’s sort of or has been removed.